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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933799.1_cds_XP_016479988.1_71477
CDS Infomation

[gene=LOC107801218] [db_xref=GeneID:107801218] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2] [protein_id=XP_016479988.1] [location=join(87938..88033,90959..91020,91151..91238,91379..91440,91516..91612,91784..92209,92724..93311,93397..93558,93752..93856,94989..95069,95769..95916,95988..96030,96336..96468)] [gbkey=CDS]
Sequence

ATGGCAAATCGAAAGGAGGATGAGAAGAATGAAAGGATTATACGGAATCTGCTTAAGCTT
CCTGATAATCGACGGTGTATGAACTGTAATAGTTTGGGCCCGCAATATGTTTGCACTAAT
TTCTGGACATTTGTTTGCACAACATGCAGCGGTATACATCGGGAGTTCACTCATAGAGTG
AAGTCAGTATCCATGGCTAAATTTACCTCACAAGAAGTTAGTGCCCTCCAAGGAGGAGGA
AATGCGAGTGCAAAGGTAATATATTTGAAGGATTGGGACACGCAGCGTAATTCTCTTCCA
GACGGCAGTAATGTAGAGAGGCTTCGTGATTTTATTAAGCATGTCTATGTGGATAGAAGA
TACACTGGTGAAAGGAGCTTTGAGAAGCCACCAAGGGGGAAAATGGCTGAAGCTGAGAAC
CTAAGCGAAAACAGGAAGACAGATACCTACCAAAGTGGGTCTCGAAGCCCACCAAATGAG
GAAGTATATGAGCGACGATACAGCAACAGGCCTAGTCCTGGTGGGAGTAGTGGTGGGAGA
AGTCCTGGATATGATCAAAGAAGTCCTGCACGTGCTGAAGTAATCAATGACTGGCGACGA
GAGGATAGATTCGGGAATGGAAGGAGATCTGATGATGGTAGAATTTCGGATGGAGGATCC
AAGTTTGAAAGCATGTCACCTGATCGTCAAAGCGACCTTGACTCATCCAGTCCCCCAATG
GTTCGACCTGTTAGAGAGATTCTTGGAGACAGTGTATCTCCCCTTCGAGTTATTGAACCT
CCAAAAACCAATGGTGGTAGGTCTGCTGCTGGTGGCTCCGTGCTAACCCAGAGGACTGCA
TCTTCCAGTAGCTTGACGTCCTCCAACGGGAACCCTGTTGAACTTAAGACAGAAACCTCA
TTAATCGATTTTGATGATGTTCCTGAACCTGCAGCTTCTGCACTGGCCCCACAAATACAA
CAATCTGCTACAGCCATACCCGTTGCACAACCGACAAAATCTGCTGCTGACAACTGGGCG
AATTTTGATTCATTAGCAGAGGTGAAAGCATCTCCAGTTCCTTCAAACACCAATCTACTG
GAATCTATATTCTCAGAGTTGGCTGCTCCAGCAACTGTAACTGGTCACTCTGCAGCACCT
CCAGGTGGTAGTGCACCTCCAGTCACTCCCTTCAGTAGTTTTGTTCCTGGAGCTGCAACT
GTGGAAAACTCAGTAGCATTTCCATTTGGTGGTGCTTCAGCTGCACCCACTGGACCGACA
TCACTACCGCCGGTTAGTGGTGGTAATGGCTTCGCAAATAATCCCGGAGGACAATGGTCT
AATATGCTACCTCAGCAGAGTTCCTTGTTTCCTGTGACTGGCCCACAGCCCATATCGCAG
CTTTCTACTCCAGCTGCTGGTGGACCTTCTGGAAATCAGTGGAATCCTTCGGTTACCGCA
ACTACACCTGGGTTTCCTAGTACGGGAACTGCACAAGTGTCTCAAGGTGTAAACCCTGCC
CTTCTGGGAGCCACTTCTGCAGTTGCATCTCAAGCTGCTCCTGTTGAAATCAAATCTAGT
GGAAGGAAACAACTGCCTGAGGATTTGTTTGCTGTAAATTATTCTTCAATTCCTGGTGCT
TTTCCGGGCTGGCATACTGGTCCACAGCATGGCTATGGATTCGCAATGCAATACAACATG
TCTATGGCTACAAATGCTTTGCCACAGCCATCAAAATCAGCAAATCCTTTTGATGTCATA
AACGAGCCATCTTCACAAGCCTCAACGTTTCCGTCAATGGCATCATTACAAGGTGCATTA
CCGAACATGGTCCCTCCAACTGGATTGCTGCATACATCCAGCCTCGGTGCCCCAACTTCT
TATCCTCCGGCAATGCCTCAGCAGTCACCATCTTATGCATCAGCAGTTCCACCAGGCTCA
TACATGGGGCATCAAGTAGCTGGTAGCATGCCACAAAGATCACCAGGAGTAGCAAGCTTT
GGCTTCGACGCTTTTGGAGCTCTAAACTCGAATCAGCAGCCAGGTGGATTATATTCTGCA
CCCGCTTCCCAGAACACCTTCTCTTCTTCTGGAGGAAACCCATTTGGTTAA

Peptide Sequence

PEP ID

XP_016479988.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Nicotiana tabacum]
Sequence

MANRKEDEKNERIIRNLLKLPDNRRCMNCNSLGPQYVCTNFWTFVCTTCSGIHREFTHRV
KSVSMAKFTSQEVSALQGGGNASAKVIYLKDWDTQRNSLPDGSNVERLRDFIKHVYVDRR
YTGERSFEKPPRGKMAEAENLSENRKTDTYQSGSRSPPNEEVYERRYSNRPSPGGSSGGR
SPGYDQRSPARAEVINDWRREDRFGNGRRSDDGRISDGGSKFESMSPDRQSDLDSSSPPM
VRPVREILGDSVSPLRVIEPPKTNGGRSAAGGSVLTQRTASSSSLTSSNGNPVELKTETS
LIDFDDVPEPAASALAPQIQQSATAIPVAQPTKSAADNWANFDSLAEVKASPVPSNTNLL
ESIFSELAAPATVTGHSAAPPGGSAPPVTPFSSFVPGAATVENSVAFPFGGASAAPTGPT
SLPPVSGGNGFANNPGGQWSNMLPQQSSLFPVTGPQPISQLSTPAAGGPSGNQWNPSVTA
TTPGFPSTGTAQVSQGVNPALLGATSAVASQAAPVEIKSSGRKQLPEDLFAVNYSSIPGA
FPGWHTGPQHGYGFAMQYNMSMATNALPQPSKSANPFDVINEPSSQASTFPSMASLQGAL
PNMVPPTGLLHTSSLGAPTSYPPAMPQQSPSYASAVPPGSYMGHQVAGSMPQRSPGVASF
GFDAFGALNSNQQPGGLYSAPASQNTFSSSGGNPFG

Transcript Sequence

Gene sequence data has not been registered.